Installation

git

Using git:

git clone https://github.com/SitaoZ/GenoKit.git
cd GenoKit
python setup.py install

pip

Or pip:

pip install GenoKit

GenoKit is tested with Python 3.8

Optional requirements

• python >= 3.7.6 python

• pandas >= 1.2.4 pandas

• gffutils >= 0.10.1 gffutils

• setuptools >= 49.2.0 setuptools

• BioPython >= 1.78 biopython

Install them all with conda:

conda install --channel conda-forge --channel python pandas gffutils setuptools biopython